From DNA to Decision

HudsonAlpha Scientific Services

Unlock the Power of Genomics with HudsonAlpha

HudsonAlpha Institute for Biotechnology offers comprehensive, full-service genomic solutions, providing researchers, clinicians, and industry leaders with high-quality genomic data that drives innovation in agriculture, human health, and beyond. From DNA/RNA extraction and sequencing to advanced bioinformatics analysis, our DNA-to-decision approach ensures actionable insights from every sample.

End-to-End Genomic Services

HudsonAlpha provides complete genomic services for humans, plants, animals, bacteria, and viruses, including:

Whole Genome Sequencing (WGS)

High-quality short-read sequencing using Illumina NovaSeq X and long-read sequencing with PacBio Revio HiFi technology.

RNA Sequencing (RNA-seq and Kinnex)

Comprehensive transcriptomics to quantify and compare gene expression, annotate transcript isoforms, and perform functional analysis of mutants and edited samples across diverse organisms.

Genotyping & Variant Analysis

Accurate discovery and detection of polymorphisms, including SNPs and various structural variants, for pangenomic research, large population cohorts, and breeding applications.

De novo Genome Assembly

All-inclusive, high-accuracy service to extract, sequence, and build novel, highest quality genomes for any species, be it new, large, or complex.

Specialized Services

Advanced bioinformatics to investigate specific research areas, including sex chromosome analysis and Khufu trait mapping analysis.

Our services are designed to support precision breeding, molecular genetics, functional genomics, and translational research.

PacBio Grade Molecular Weight DNA prep

Illumina Grade DNA prep

DNAase treatment of RNA

CCSExpress Library (HiFi) Indexed

High throughput HiFi library construction

Isoseq Express

Kinnex Library

PacBio 16S Library

Illumina PCRfree Library

Illumina nano amplified Library

Dovetail OmniC library

Low-pass sequencing library plates

Custom targeted enrichment sequencing

Revio SMRT sequencing

Illumina NovaSeq X sequencing

Variant calling on RUO human data

Genome Assembly & Annotation

PacBio data analysis

Genotyping

Genome editing and transgenic support

Custom consulting and analysis services

Agriculture & Crop Improvement Services

HudsonAlpha is a leader in agricultural genomics, helping partners achieve improved crop traits, biodiversity preservation, and pangenome analysis:

Trait Mapping with Khufu

Efficiently identify functional SNPs and QTLs to accelerate marker-assisted selection and breeding programs.

Sex Determination Analysis

Detailed genomic characterization of sex-determining loci and chromosomes in various species, including both plants and animals, to support both basic research and breeding applications.

Pangenome Assemblies

Construction of comprehensive multi-reference pangenomes that capture and enable better utilization of the full genetic diversity across plant and animal species.

Biodiversity & Conservation

Application of genomics tools to enhance sustainability and preserve genetic diversity.

Our collaborative efforts span seed repositories, agricultural research institutes, and food processors, translating genomic insights into practical applications for yield improvement, disease resistance, stress tolerance, and other benefits.

Human RUO Services

The HudsonAlpha Genome Sequencing Center, part of the HudsonAlpha Institute for Biotechnology, offers comprehensive human long-read genome sequencing using the advanced PacBio Revio platform. As a PacBio Certified Service Provider and trusted NIH collaborator, we provide full-service sequencing, from DNA extraction through advanced analysis, designed to uncover complex genomic variation with unmatched resolution.

Our Revio-based HiFi sequencing services are ideal for uncovering structural variants, repeat expansions, haplotypes, and other genomic elements that can be overlooked by short-read platforms.

Whether your research focuses on rare disease, pediatric cancer, or population-scale genomics, HudsonAlpha delivers publication-ready data and scientific partnership.

Advanced Long-Read Sequencing with PacBio Revio

HudsonAlpha provides PacBio Revio long-read sequencing, enabling detailed exploration of complex genomes. Key Advantages:

High-Fidelity Long Reads

Exceptional accuracy, ideal for complex genomic regions.

Structural Variant Detection

Detect large insertions, deletions, and complex rearrangements.

De novo Assembly Excellence

Generate complete, contiguous genome assemblies for novel or complex organisms.

Scalable Workflow

Efficient for both small and large projects.

PacBio Revio complements short-read sequencing, creating a comprehensive toolkit for genome assembly, variant discovery, and functional genomics.

Sequencing Excellence with Illumina NovaSeq X

The NovaSeq X enables rapid and reliable generation of short-read genomic data, supporting both fundamental research and applied genomics.

High Throughput

Accelerated sequencing for large sample volumes.

Cost Efficiency

Reduced per-sample costs without compromising quality.

Scalability

Flexible solutions for research, breeding programs, and clinical studies.

Why Choose HudsonAlpha Scientific Services?

Expertise

A team of seasoned scientists and bioinformaticians dedicated to your success.

Innovation

Access to cutting-edge sequencing technologies and analysis tools.

Collaboration

Dedicated support to meet client-specific research and breeding goals.

Quality

Rigorous quality control ensures reliable and reproducible genomic data.

Get Started with HudsonAlpha

Turn your genomic data into actionable insights. Contact HudsonAlpha today to discuss your genomics projects.

HudsonAlpha Institute for Biotechnology: Advancing science, improving lives through cutting-edge genomics.

Contact Information

Address: 601 Genome Way, Huntsville, AL 35806