Move Beyond the Single Reference Genome: Advanced Pangenome Analysis & Short-Read Genotyping
See how KhufuPAN Graph analysis successfully identified the genetic traits responsible for resistance to the Tomato Spotted Wilt Virus in peanuts, solving a decades-long mystery.
The Khufu Advantage
- Pan Graph Founder Mapping: Stop forcing complex genomes into a single reference. We map short-read data directly to a custom pan graph of your specific population founders.
- High-Volume Bulk Genotyping: Cost-effective, high throughput, low-pass short read WGS designed for massive agricultural cohorts and crop breeding programs.
- End-to-End Handling: From high molecular weight DNA extraction to final trait identification, our experts handle each step of the process with care and precision.
Khufu Service Levels
Depending on your project, choose from standard bulk short-read data, mapping to a traditional reference genome, or our premium KhufuPAN Graph founder mapping services.
Expertise
25+ years of proven scientific expertise trusted by 800+ clients worldwide
Flexible
Adaptable project sizing for both academic grants and private AgTech companies.
Agricultural Specialists
Deep expertise in complex plant genomes, crop improvement, and animal breeding applications.
Full Service
Seamless workflow from extraction to advanced bioinformatics analysis.
Have other questions? Contact us at development@hudsonalpha.org for more information.